Pipeline to Identify Hydroxyproline-Rich Glycoproteins
نویسندگان
چکیده
منابع مشابه
Breakthrough Technologies A Motif and Amino Acid Bias Bioinformatics Pipeline to Identify Hydroxyproline-Rich Glycoproteins
Intrinsically disordered proteins (IDPs) are functional proteins that lack a well-defined three-dimensional structure. The study of IDPs is a rapidly growing area as the crucial biological functions of more of these proteins are uncovered. In plants, IDPs are implicated in plant stress responses, signaling, and regulatory processes. A superfamily of cell wall proteins, the hydroxyprolinerich gl...
متن کاملA bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins.
Hydroxyproline-rich glycoproteins (HRGPs) are a superfamily of plant cell wall proteins that function in diverse aspects of plant growth and development. This superfamily consists of three members: hyperglycosylated arabinogalactan proteins (AGPs), moderately glycosylated extensins (EXTs), and lightly glycosylated proline-rich proteins (PRPs). Hybrid and chimeric versions of HRGP molecules also...
متن کاملLocalization of soluble and insoluble fractions of hydroxyproline-rich glycoproteins during maize kernel development
Monoclonal antibodies have been developed against PC-1 protein, the major hydroxyproline-rich glycoprotein (HRGP) from maize pericarp, and have been used as probes in an indirect alkaline phosphatase antibody assay to localize this protein in tissue of three maize varieties. Kernels were sampled several days after pollination (d.a.p.). HRGPs were assayed by reacting antibodies with tissue print...
متن کاملBiochemical and tissue print analyses of hydroxyproline-rich glycoproteins in cell walls of sporophytic maize tissues.
In an effort to understand the role of hydroxyproline-rich glycoproteins (HRGPs) in plant cell wall structure, we studied the distribution and physical properties of PC-1-like proteins (PC-1 being the major pericarp HRGP) throughout sporophytic tissues of two maize (Zea mays L.) varieties. We determined total amounts of hydroxyproline, an indicator of HRGPs, and did tissue print and Western blo...
متن کاملInsights into the Evolution of Hydroxyproline-Rich Glycoproteins from 1000 Plant Transcriptomes1[OPEN]
Australian Research Council Centre of Excellence in Plant Cell Walls, School of BioSciences, University of Melbourne, Parkville, Victoria 3010, Australia (K.L.J., A.M.C., A.L., A.B., M.S.D.); Departments of Biological Sciences and Medicine, University of Alberta, Edmonton, Alberta, Canada, and BGI-Shenzhen, Bei Shan Industrial Zone, Yantian District, Shenzhen, China (G.K.-S.W., E.J.C.); Florida...
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ژورنال
عنوان ژورنال: Plant Physiology
سال: 2017
ISSN: 0032-0889,1532-2548
DOI: 10.1104/pp.17.00294